DESCRIPTION

Redi is a free downloadable software prototype for non commercial purposes (see below) upon acceptance of this licence. Redi is a reaction-diffusion simulator, built to test new diffusion mod- els and algorithms. Redi simulates biochemical systems at the mesoscopic scale of interaction, employing a space discretized variant of the Gillespie SSA. Diffusion coefficient are not fixed, but computed dynamically in a state-dependent way, inspired to the Maxwell-Stephen model of transport phenomena.

SCREENSHOTS

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Other resources

• Quick Start Guide
• .NET Framework download (required)

REFERENCES

• Paola Lecca, Lorenzo Dematté, and Corrado Priami. Modeling and simulating reaction-diffusion systems with state-dependent diffusion coeffcients.. In Proceedings of World Academy of Science, Engineering and Technology - Int. Conference on Bioinformatics and Biomedicine, volume 35. , 2008

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