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| Title | Authors |
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Node centrality indices in food webs: rank orders versus distributions
Ecological Complexity To Appear, 2010 | B. Bauer
Ferenc Jordan
J. Podani
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The Measurable Space of Stochastic Processes
QEST 2010 To Appear, 2010 | Luca Cardelli
Radu Mardare
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Modelling and Analysis of the NF-$kappa$B pathway in Bio-PEPA
Transactions on Computational Systems Biology XII, LNBI, 5945:229-262, Springer-Verlag, 2010 | Federica Ciocchetta
Andrea Degasperi
John K. Heath
Jane Hillston
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Investigating modularity in the analysis of process algebra models of biochemical systems
3rd Workshop From Biology To Concurrency and back To Appear, March, 2010 | Federica Ciocchetta
Maria Luisa Guerriero
Jane Hillston
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Bio-PEPA for epidemiological models
ENTCS (Proc. of PASM 2009), 261:43-69 , London, February, 2010 | Federica Ciocchetta
Jane Hillston
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Restriction point control of the mammalian cell cycle via the cyclin E/Cdk2:p27 complex
FEBS Journal, 277: 357-367, 2010 | Riaan Conradie
Frank J. Bruggeman
Andrea Ciliberto
Attila Csikasz-Nagy
Bela Novák
Hans V. Westerhoff
Jacky L. Snoep
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Role of mRNA gestation and senescence in noise reduction during the cell cycle
In Silico Biology, 10, Bioinformation Systems e.V., , January, 2010 | Attila Csikasz-Nagy
Ivan Mura
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Programming Biology in BlenX
in Systems Biology for Signaling Networks, Sangdun Choi (ed), , 1:777-820, Springer, 2010 | Lorenzo Dematte'
Roberto Larcher
Alida Palmisano
Corrado Priami
Alessandro Romanel
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Predicting the effects of parameters changes in stochastic models
through parallel synthetic experiments and multivariate analysis
HiBi 2010, IEEE Computer Society CPS, Twente (The Nederlands) To Appear, September, 2010 | Michele Forlin
Tommaso Mazza
Davide Prandi
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A hierarchy of networks spanning from individual organisms to ecological landscapes
in Complex Networks across the Natural and Technological Sciences, Fox, M., Higham, D., Oppo, G-L. and Estrada, E. (ed), , Springer, Berlin To Appear, 2010 | Ferenc Jordan
Gabriella Baranyi
Federica Ciocchetta
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Maintaining connectivity: topological considerations on landscape digraphs
in Sources, Sinks, and Sustainability across Landscapes, Liu, J., Hull, V., Morzillo, A. and Wiens, J.A. (ed), , Cambridge University Press To Appear, 2010 | Ferenc Jordan
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Flux Analysis in Process Models via Causality
Proceedings of the 3rd Workshop From Biology To Concurrency and back (FBTC), EPTCS To Appear, 2010 | Ozan Kahramanogullari
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Modelling self-assembly in BlenX
Transactions on Computational Systems Biology XII, 5945:163-198, Springer-Verlag, 2010 | Roberto Larcher
Corrado Priami
Alessandro Romanel
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Modelling, designing and simulating living systems with BlenX
6th International Conference on Technology and Medical Sciences , Porto, Portugal To Appear, October, 2010 | Paola Lecca
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Calibration of dynamic models of biological systems with KInfer
Eur. Biophysics J. , 39(6):1019, Springer Berlin / Heidelberg, May, 2010 | Paola Lecca
Alida Palmisano
Adaoha Ihekwaba
Corrado Priami
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Identification of biochemical chaotic systems with KInfer
Int. Journal of Simulation: Systems, Science & Technology, United Kingdom Simulation Society To Appear, April, 2010 | Paola Lecca
Alida Palmisano
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Correlation-based network inference and modelling in systems biology: the NF-κB signalling network case study
Int. Conf. on Intelligent Systems, Modelling and Simulation, pp170-175, IEEE Computer Society, Liverpool, England, January 27-29, 2010 | Paola Lecca
Alida Palmisano
Adaoha Ihekwaba
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Network inference from Time-Dependent Omics Data
in Bioinformatics for Omics data: Methods and Protocols, Bernd Mayer (ed), , Humana Press Springer Science+Businnes Media, LLC To Appear, 2010 | Paola Lecca
Phuong Nguyen
Corrado Priami
Paola Quaglia
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Redi: a simulator of stochastic biochemical reaction-diffusion systems
The Second International Conference on Advances in System Simulation (SIMUL 2010), IEEE Computer Society CPS, Nice To Appear, August, 2010 | Paola Lecca
Lorenzo Dematte'
Adaoha Ihekwaba
Corrado Priami
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Inferring the kinetic constants of cyclin-triggered expression of Cdc20 gene in eukaryotic cell cycle
Online Journal of Bioinformatics, 11(2):177-216, May, 2010 | Paola Lecca
Alida Palmisano
Adaoha Ihekwaba
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Snazer: the simulations and networks analyzer
BMC Systems Biology, 4(1), January, 2010 | Tommaso Mazza
Gennaro Iaccarino
Corrado Priami
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Estimating the divisibility of complex biological networks by sparseness indices
Briefings in Bioinformatics, 11(3):364-374, 2010 | Tommaso Mazza
Alessandro Romanel
Ferenc Jordan
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Editorial: Accelerating systems biology
Briefings in Bioinformatics, 11(3):267-269, 2010 | Tommaso Mazza
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Predicting the effects of parameters changes in stochastic models
through parallel synthetic experiments and multivariate analysis
HiBi 2010, IEEE Computer Society CPS, Twente (The Nederlands) To Appear, September, 2010 | Tommaso Mazza
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A quantitative approach to study indirect effects among disease proteins in the human protein interaction network
BMC Systems Biology, 4(103), BioMed Central Ltd, July, 2010 | Phuong Nguyen
Ferenc Jordan
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Coding biological systems in a stochastic framework: the case study of budding yeast cell cycle
1st International Conference on Bioinformatics (Bioinformatics 2010), Valencia, Spain, January, 2010 | Alida Palmisano
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GPU computing for systems biology
Briefings in Bioinformatics, 11(3):323, May, 2010 | Davide Prandi
Lorenzo Dematte'
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On the Computational Power of BlenX
Theoretical Computer Science, 411(2):542-565, 2010 | Alessandro Romanel
Corrado Priami
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Relationships between centrality indices and trophic positions in food webs
Community Ecology, 11:59-67, 2010 | Marco Scotti
Ferenc Jordan
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CoSBiLab Graph: the network analysis module of CoSBiLab
Environmental Modelling and Software, 25:886-888, 2010 | Roberto Valentini
Ferenc Jordan
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