PROTOTYPES

COSBI transforms ideas into software prototypes,
which can be used by a large community of scientists

HSimulator

Multithread hybrid stochastic/deterministic simulation of biochemical reaction networks.

NASFinder

The Network Activity Score Finder (NASFinder) is a web service for topological and functional analysis of sub-networks connecting an omics-determined module.

L

An imperative, domain specific language to stochastically simulate biological systems

BI-SCUDO

Biomarker Identification-Sample Classification SCUDO

SCUDO

SCUDO is a tool for clustering gene expression profiles for diagnostic purposes using a new type of rank-based signatures

RSSA

Rejection-based Stochastic Simulation Algorithm

SICOMPRE

Simulation-based, qualitative and quantitative prediction of protein complexes.

BetaWB

BetaWB builds molecular and scalable models as well as manages complexity and the combinatorial explosions of models

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